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Claudine Chaouiya

C. Chaouiya Group leader, Instituto Gulbenkian de Ciência IGC

also
Assistant Professor at the Aix-Marseille University (AMU), Marseille FRANCE (currently in secondment)


Latest publications:

Fauré A, Vreede BMI, Sucena É, Chaouiya C , A Discrete Model of Drosophila Eggshell Patterning Reveals Cell-Autonomous and Juxtacrine Effects, PLoS Comput Biol 10(3): e1003527, 2014 DOI

Castanhinha R, Araújo R, Júnior LC, Angielczyk KD, Martins GG, Martins RM, Chaouiya C, Beckmann F, Wilde F., Bringing dicynodonts back to life: paleobiology and anatomy of a new emydopoid genus from the upper permian of Mozambique., PLoS One 8(12):e80974, 2013 DOI

Claudine Chaouiya, Duncan Berenguier, Sarah M Keating, Aurelien Naldi, Martijn P van Iersel, Nicolas Rodriguez, Andreas Dräger, Finja Büchel, Thomas Cokelaer, Bryan Kowal, Benjamin Wicks, Emanuel Gonçalves, Julien Dorier, Michel Page, Pedro T Monteiro, Axel von Kamp, Ioannis Xenarios, Hidde de Jong, Michael Hucka, Steffen Klamt, Denis Thieffry, Nicolas Le Novère, Julio Saez-Rodriguez and Tomás Helikar , SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools, BMC Systems Biology 2013, 7:135, 2013 DOI

F. Büchel, N. Rodriguez, N. Swainston, C. Wrzodek, T. Czauderna, R. Keller, F. Mittag, M. Schubert, M. Glont, M. Golebiewski, M. van Iersel, S. Keating, M. Rall, M. Wybrow, H. Hermjakob, M. Hucka, D. Kell, W. Müller, P. Mendes, A. Zell, C. Chaouiya, J. Saez-Rodriguez, F. Schreiber, C. Laibe, A. Dräger, N. Le Novère, Path2Models: large-scale generation of computational models from biochemical pathway maps, BMC Systems Biology 2013 7:116 , 2013 DOI

Chaouiya C, Ourrad O, Lima R, Majority Rules with Random Tie-Breaking in Boolean Gene Regulatory Networks, PLoS ONE 8(7): e69626, 2013 DOI

D. Bérenguier, C. Chaouiya, P. T. Monteiro, A. Naldi, E. Remy, D. Thieffry, and L. Tichit, Dynamical modeling and analysis of large cellular regulatory networks , Chaos 23, 025114, 2013 DOI

Chaouiya C, Remy E., Logical modelling of regulatory networks, methods and applications (Editorial), Bull Math Biol. 2013 Jun;75(6):891-5., 2013 DOI

N.D. Mendes, F. Lang, Y-S. Le Cornec, R. Mateescu, G. Batt, C. Chaouiya, Composition and abstraction of logical regulatory modules: application to multicellular systems, Bioinformatics, 29(6): 749-757, 2013 DOI

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